No offense taken, just didn’t feel like typing a long reply.
I only meant that you’re running a unique exhaust and it will require a unique tune, that CES tune will be all wrong.
The lack of L table tuning is a nonissue for most bikes, but, if you want to keep everything in place then use them. Zeroing them just eases the Dyno operators life a lot.
Regarding O2 sensor, really there’s no right answer in my opinion. On and Off have their pros and cons.
In your case, I would take a TORs basetune, set the FL transition to something under 11 but over 3, open secondaries 100% full table, copy i3 into i2 and i1, raise speed limit to 299, fan turn on to 99, redline to 6700 and go to the dyno.
All restrictions removed and ready to be tuned. That’s to say, it’ll work as a goodoptimized stock tune when done, different reworked ignition tables would benefit you.