I work with centrifugal blowers and air movement systems so let me throw this out to you.
You talked about the rock in water thing, what you have to realize is that the flow in the stream never changes (has no restriction) were as in the intake you have one size opening in the first stage of the intake (filter area) then a smaller hole were it enters the motor. So unless you open that second hole VOLUME threw there is constant. So by putting the a velocity intake on you are changing pressure and speed of flow but not volume threw the secind hole so unless you have a blockage are restriction just before the second intake the rods shouldn't make any kind of noticeable difference.
Look at a garden hose one with the nozzle you adjust by turning. The hose can only deliver a constant volume of water but you can adjust the pressure and speed of flow buy opening or restricting the nozzle but the volume the hose can carry doesn’t change. So say you put a nail threw the hose about 6” up the hose volume at the nozzle with remain constant because of the restriction at the smaller end of nozzle. The small hole can’t move the same volume as the big hole so unless you can get more air threw a small hole than a big hole I don’t think you will notice any kind of difference.
Doe’s any of this make since or am I way off here.
What you need Hombre is a CFD computer modeling program the models flow. You put the design in (in this case a computer model of the R3 intake) and the program shows you how to improve flow. We have one here and it is cool watching how things can change the flow in a machine.